Insertion junction: CLIP2.069927_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.069927
Chromosome:chromosome 1
Location:3832508
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g025050 (1 of 9) PTHR10071 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTTATAGTCCCGGTGGTCTTATACTGCTCACCGCCCTCGCGGGCAAGT
Internal bar code:TCGGAGGCTATTAAAAAATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:809
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAACACGTTTGGGGTTAC
Suggested primer 2:GGGTGCCGTCCATATCTGAG