Insertion junction: CLIP2.069928_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069928
Chromosome:chromosome 1
Location:5311031
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g037400 CYN3,CYN19A,CYN19-1 (1 of 2) K12868 - pre-mRNA-splicing factor SYF2 (SYF2); Cyclophilin 19-1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTCCGGTGGCTAGGGGCCACGATCTCGCCCAGTTCACGACATGCGCAA
Internal bar code:ATCGCCAATAGAGGCTGAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:297
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGGGAGGCGTTCTGGAG
Suggested primer 2:AACCAAGTCTTCCGCTCCTG