Insertion junction: CLIP2.069939_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.069939
Chromosome:chromosome 16
Location:1463768
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g652650 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGGGATTTTACTGCCCAAGCGTGTTACTTTGTCCATCACCTTAAAGA
Internal bar code:AGGTCACCGGAATGGCTATAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:868
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCATACGCAGCTTGCTTCTC
Suggested primer 2:AGCATCTGGTCGACTAGGGT