Insertion junction: CLIP2.069947_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.069947
Chromosome:chromosome 8
Location:3763847
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGACCTCATATGATTGTAGGACTGAACGGCGTCCCAGTGATTTAGCGAA
Internal bar code:AATAGTTACTATCTCGTATTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2059
LEAP-Seq percent confirming:41.6667
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTTTTGAAGGCGGTAGCT
Suggested primer 2:CTAGGAGAATCTGCGGCAGG