Insertion junction: CLIP2.069948_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069948
Chromosome:chromosome 2
Location:2366713
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g090900 MCP9 (1 of 15) IPR002067//IPR018108//IPR023395 - Mitochondrial carrier protein // Mitochondrial substrate/solute carrier // Mitochondrial carrier domain; Mitochondrial substrate carrier protein outside_mRNA
Cre02.g090950 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCATAGAAGATAAGAATGATGGATTACCGTTGCTGTAACTTGGAGCTT
Internal bar code:ATCCGTGCCGTCGTGTGTAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4976
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCCCCATTCATTGAAGCT
Suggested primer 2:TCCTGCCTCGCAATCTGTTT