Insertion junction: CLIP2.069955_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.069955
Chromosome:chromosome 15
Location:883200
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre15.g640200 (1 of 10) IPR004087//IPR004088 - K Homology domain // K Homology domain, type 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTAACACGCCCGGCGCGTTTCTTCCCTGTGGAAACGTGCCAATTCATT
Internal bar code:GAGTTGGTAAATTGCTTGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:74
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GACGAATGCGACGTGGATTG
Suggested primer 2:TTACGTTGAGCTGGAGCCAG