Insertion junction: CLIP2.069957_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069957
Chromosome:chromosome 12
Location:3964771
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g515550 VPS33 SM/Sec1-family protein; (1 of 1) PTHR11679//PTHR11679:SF1 - VESICLE PROTEIN SORTING-ASSOCIATED // VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 33B 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTGGCGGAGAACCGCGCGGCAGGGTTGTTGTGTGACCTGACTGAACA
Internal bar code:CACATCGTCTTAAGCGGGAACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1536
LEAP-Seq percent confirming:98.5294
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCGCAACGTCTTCCTTG
Suggested primer 2:TCATGACACCGTTGAGCACA