Insertion junction: CLIP2.069962_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069962
Chromosome:chromosome 17
Location:6001343
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g742550 3'UTR
Cre17.g802126 (1 of 68) 2.1.1.43 - Histone-lysine N-methyltransferase / Protein-lysine N-methyltransferase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTAATTATCTGTACACGGCATTGCCGGTTGGGAGGATCAGCGGCCAGCA
Internal bar code:ACCTTTGGGTAGGGTCTAGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2928
LEAP-Seq percent confirming:77.907
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATAGATGTTGCACCTGC
Suggested primer 2:TTCATTCCGGACCTCAGCAC