Insertion junction: CLIP2.069963_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069963
Chromosome:chromosome 2
Location:5645562
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g115600 MSC7 Predicted protein with mechanosensitive ion channel domain; (1 of 1) IPR002048//IPR006685//IPR010920//IPR020568 - EF-hand domain // Mechanosensitive ion channel MscS // LSM domain // Ribosomal protein S5 domain 2-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCCATGGGTACTCAGGGGCACTCACGATGGCAGGCCGTGCGCATGCAC
Internal bar code:TCCAGGTCGCTAAAGTTATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4975
LEAP-Seq percent confirming:88.6792
LEAP-Seq n confirming:94
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:106

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTCGCAGTATCGCATCC
Suggested primer 2:GGTTACACGCAACCAACACC