Insertion junction: CLIP2.069968_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069968
Chromosome:chromosome 10
Location:3081240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441250 TMEM231 (1 of 1) K19362 - transmembrane protein 231 (TMEM231); Transmembrane protein 231 3'UTR
Cre10.g441300 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTTCAGGGCTTGCAAGTGCCTTGTACTTACACCGCACGCAGTAGATGC
Internal bar code:ATGTAGGTTTTAGTGGTATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4716
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCAGGTTGCTGAAGTCTC
Suggested primer 2:TCATGGACACCTCGGAAAGC