Insertion junction: CLIP2.069973_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069973
Chromosome:chromosome 7
Location:3706021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g337800 MRPS17,uS17m (1 of 3) PTHR10744 - 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER; Mitochondrial ribosomal protein S17 5'UTR
Cre07.g337850 (1 of 10) IPR005828//IPR020846 - Major facilitator, sugar transporter-like // Major facilitator superfamily domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTTCATATCGTTACTGCAACTGGATAGCGACACAGTAATGACGCAGT
Internal bar code:ACTCTCTAGATTCAGGGAATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2821
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGATACTGCTCCGACGTC
Suggested primer 2:TGCAGCTCACATGACTCAGG