Insertion junction: CLIP2.069977_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069977
Chromosome:chromosome 6
Location:7033304
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800729 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGACATGCATTTCGTTGGTTCAATATTAATGTTCACTTTGGACTTTCT
Internal bar code:GGGGGTGAGCAGAGGCTTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1052
LEAP-Seq percent confirming:26.7857
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CGATGAAGCCGAGCTGTTTG
Suggested primer 2:CGTATTCGGAGTGGATGGGG