Insertion junction: CLIP2.069981_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.069981
Chromosome:chromosome 6
Location:8139292
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g305850 SMM20 (1 of 2) PTHR12176:SF28 - S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-LIKE PROTEIN; S-adenosyl-L-methionine-dependent methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCCCGCAGTAATGCCTGCCCGCCAATACGGATGGGCACAGTACCCGA
Internal bar code:GCTCTGCCGTGGGCCGTCTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:306
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATGTTGGGGCTGTTAAC
Suggested primer 2:CAGTATACGCCGGTCACTCC