Insertion junction: CLIP2.069990_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069990
Chromosome:chromosome 12
Location:8883001
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g546050 DXR,DXR1 (1 of 1) 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase / DXP-reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCTAACCACACTATCACACCCATGGTGGCCGTTACCTCCGCCTGCCTG
Internal bar code:CTCTCCAGCACGGTATGGCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1284
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCCCACATTCCCATCCT
Suggested primer 2:GTCTCTCCCGCGTTTCTGAA