Insertion junction: CLIP2.070001_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.070001
Chromosome:chromosome 12
Location:8691380
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g547750 SCS1,SPCS,SPCS1 (1 of 1) 2.9.1.2 - O-phospho-L-seryl-tRNA(Sec):L-selenocysteinyl-tRNA synthase / SepSecS; Selenocysteine synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTATATGATACTTCCACTATCCGCCAGTCCATCCCACCCCACCCCATCC
Internal bar code:GTTTCAGTTACACACCGGTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:286
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCGCTTTGCTAATCATGC
Suggested primer 2:GAGTGGACGTCTGTGAGGTG