Insertion junction: CLIP2.070006_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070006
Chromosome:chromosome 6
Location:3504918
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278116 (1 of 1) IPR008136 - CinA, C-terminal 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGATGTAACTCATTAGGAGCTGCACGTAGATCCTCGCCTTCTCGTCAAG
Internal bar code:CTCGGGGCTTTGGGTGGGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:719
LEAP-Seq percent confirming:46.1538
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGCTGTGCAAAACCTTG
Suggested primer 2:TTCATCGGGAAAGAAGGGGC