Insertion junction: CLIP2.070006_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070006
Chromosome:chromosome 6
Location:3504927
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278116 (1 of 1) IPR008136 - CinA, C-terminal 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACATCAGAACTCCAGCCGCTGCTTACACAGATTTTGTTTCCTTGCTGC
Internal bar code:GTAGTAGCAAAATAGCGGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:819
LEAP-Seq percent confirming:23.0769
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:TTCATCGGGAAAGAAGGGGC
Suggested primer 2:GGAGGCTGTGCAAAACCTTG