Insertion junction: CLIP2.070008_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070008
Chromosome:chromosome 6
Location:4146549
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278230 (1 of 7) 2.7.11.1//2.7.11.17 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase // Calcium/calmodulin-dependent protein kinase / Microtubule-associated protein 2 kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGGAATGCATTGCAAGGGCAACCACGCCTGGGGCGTGTGGTTGCCTGT
Internal bar code:GTCGGGAGTTCTTTAATAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1200
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACACACTCTGCAACG
Suggested primer 2:TGCGTTCAAGTGAGACCCTC