Insertion junction: CLIP2.070011_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070011
Chromosome:chromosome 13
Location:1191909
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569850 AMT4,AMT1D Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACCCTTGCTCGCGATTCAACAGCGGCGCTCGCGCTCCGCAGCAACATG
Internal bar code:GTTCGCCCAGTTATCGCGTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1316
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGAACGAGCCGCAATTA
Suggested primer 2:TCAGCGACTCAAGCGAAACT