Insertion junction: CLIP2.070013_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070013
Chromosome:chromosome 3
Location:1501915
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g151550 (1 of 1) IPR000104//IPR029060 - Antifreeze protein, type I // PIN domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTCAACAGGTGAGCTGTAGCGTCAGCCCCTCTGCTCCCGCTCCCCCG
Internal bar code:AAGTTATGCAAGTAAGTTTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:665
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TATCGCGCACGCTTAAGTCT
Suggested primer 2:ACACCCGCATGATGTCCATT