Insertion junction: CLIP2.070021_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070021
Chromosome:chromosome 10
Location:1859916
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g431050 SRR13 (1 of 1) PTHR19331//PTHR19331:SF253 - LYSYL OXIDASE-RELATED // SUBFAMILY NOT NAMED; Speract/scavenger receptor, transmembrane glycoprotein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCCTTCCTTACCGCCGCATTCACACCCCCCTCGACCGGGCCACAGGCC
Internal bar code:TCCCGTTGAAGGCAAAGGCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1779
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGTGCGCTCAAGTACTCC
Suggested primer 2:TGAATCCAGCCCCATGCAAT