Insertion junction: CLIP2.070021_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070021
Chromosome:chromosome 10
Location:1859918
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g431050 SRR13 (1 of 1) PTHR19331//PTHR19331:SF253 - LYSYL OXIDASE-RELATED // SUBFAMILY NOT NAMED; Speract/scavenger receptor, transmembrane glycoprotein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGGTGGTGATGCCGTAGGCCCGGTGGAGAGCAAGGGGACGAGCAGGG
Internal bar code:TCGCATGGAGCTTTGAAACCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1940
LEAP-Seq percent confirming:44.0678
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:TGAATCCAGCCCCATGCAAT
Suggested primer 2:ACTGTGCGCTCAAGTACTCC