Insertion junction: CLIP2.070030_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.070030
Chromosome:chromosome 2
Location:7940469
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g145452 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCCGGCAGCTAGACCAAAGGCGGGTAAAGCCTGTCACTTCAGTGCAG
Internal bar code:GGAGGTTGCGACGTCTGCCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1522
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCGGCAGCACAACCATA
Suggested primer 2:GCTTGTGCCATTTGTGACGT