Insertion junction: CLIP2.070032_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.070032
Chromosome:chromosome 17
Location:3160484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720850 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCATGCTGCACCGGGTGCTGGCGTGGATCGCCGTTATGGGGCAGCAGCT
Internal bar code:GACCGCGAGCGCCGAGGACTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1155
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTGCTCCATTTCTCCTT
Suggested primer 2:TTTAGTACTGCCTGCCTGCC