Insertion junction: CLIP2.070035_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070035
Chromosome:chromosome 3
Location:3800749
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169850 TSC1 (1 of 1) PTHR10890:SF3 - CYSTEINE--TRNA LIGASE, CYTOPLASMIC; Cysteinyl-tRNA synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGAAGGAGCCCAATCATCTGACGGACGCAGAGGGTTGGGACAGGGGT
Internal bar code:TTAATACCCATGTTTGGGCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4250
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:ATCACTTTCGCCATGACCGT
Suggested primer 2:TCACGCTCCGGCTTAGATTC