Insertion junction: CLIP2.070039_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070039
Chromosome:chromosome 3
Location:3542765
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800317 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTAGATAGGCTAGGGGTTGGCCGCCGCCGCTGGCGAGAAGTAAGGAC
Internal bar code:GCTTCAATTGGAAATAGTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1310
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGGCTGTATGCTGAAGGG
Suggested primer 2:ATTGACCAGGTTACCAGGCG