Insertion junction: CLIP2.070040_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070040
Chromosome:chromosome 7
Location:5312546
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349950 (1 of 1) K03131 - transcription initiation factor TFIID subunit 6 (TAF6) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCAGGGGACCATGTTGGGTCCAGCGCGGCTTGCGCGTTTTGGCGGGT
Internal bar code:AATGCGAGGAGAACAGGTTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1501
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAACTCACACCAGGCACG
Suggested primer 2:AGGTCATTTGGTGGAGGCAG