Insertion junction: CLIP2.070041_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070041
Chromosome:chromosome 11
Location:158733
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g467541 (1 of 3) PTHR13780//PTHR13780:SF49 - AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCAGTCTGGGCCCTCAGGCCAGGACCCCAGCATCCGGCCTCACTTAGG
Internal bar code:CTTGTCTATGGTTCCCTAGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:50
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTCAACGACATCCTCAA
Suggested primer 2:GCCCTTCCCATTCTACCACC