Insertion junction: CLIP2.070045_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070045
Chromosome:chromosome 7
Location:3920939
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g339350 (1 of 1) K14050 - geranylgeranyl transferase type-2 subunit alpha [EC:2.5.1.60] (RABGGTA) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTGTATAAAAGTCACATATAAAAATGCACGGCCGTCCCAGAGAATACA
Internal bar code:TTGTCACGGACATATATTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1912
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCGTGCTAAGGATCCAG
Suggested primer 2:GCCCCTCAAGAAACCCTACC