Insertion junction: CLIP2.070053_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070053
Chromosome:chromosome 6
Location:903563
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGAAAACAGGAAGAATTCGGCCAAGACTCTCAAGAAGTACATACCTG
Internal bar code:GAGTCCGCGTGAAGTCAGTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1041
LEAP-Seq percent confirming:82.5
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCGAAACTAGCTGACGTT
Suggested primer 2:CGGCGCTCTAGAGGTTACAG