Insertion junction: CLIP2.070059_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070059
Chromosome:chromosome 2
Location:8338801
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g143000 PLSB1,GPA1,GPAT1 (1 of 1) K00630 - glycerol-3-phosphate O-acyltransferase (ATS1); Glycerol-3-phosphate acyltransferase, chloroplast precursor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAAGTCTGTGCACCGCCACAGCCAACACTCAGGGTGACTCACAATGTG
Internal bar code:GGTTCATTAGACCTGACTGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:973
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTAAGGTGCGTAATTGCGGC
Suggested primer 2:AGTGCGAGATCAGCATAGGC