Insertion junction: CLIP2.070060_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070060
Chromosome:chromosome 2
Location:6843855
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388393 ELG13 (1 of 39) PTHR11062//PTHR11062:SF21 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // SUBFAMILY NOT NAMED; Exostosin-like glycosyltransferase 13 3'UTR
Cre09.g388430 (1 of 2) IPR000104//IPR001202 - Antifreeze protein, type I // WW domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCATCAAAGGTCAAAGGAATTTGGGTTTCTCCCACAAGTGGTGGGCTGA
Internal bar code:CTTTGTTACTAGCCCACATGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3750
LEAP-Seq percent confirming:91.9355
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGGCGCAATCAGTAGTAT
Suggested primer 2:TGGCCTACAACTACACGCTG