Insertion junction: CLIP2.070062_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070062
Chromosome:chromosome 16
Location:5398182
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683000 (1 of 100) IPR001810 - F-box domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTCACAGTATCGCCTTGCCCGTTGCGAGGGCAGATTGCACCAGTTAC
Internal bar code:CTGATACGTGGGGTTAGCGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1511
LEAP-Seq percent confirming:71.875
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TATCTTGGCTGCGCAAGTGA
Suggested primer 2:CCACACTGGGGAGGATAGGA