Insertion junction: CLIP2.070068_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070068
Chromosome:chromosome 14
Location:226390
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g609100 (1 of 6) PTHR13339//PTHR13339:SF0 - COP9 SIGNALOSOME COMPLEX SUBUNIT 8 // COP9 SIGNALOSOME COMPLEX SUBUNIT 8 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGCCACCGCCTTGTGCGCCTGCTCCGCCAACCGCAGCAGGTGCTGCA
Internal bar code:AAATGATTAGGGCCTGTTGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3705
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:171
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:171

Suggested primers for confirmation by PCR

Suggested primer 1:GGACACCAATTGCGTTTGCT
Suggested primer 2:ATGCATTGGATAACGTGCGC