Insertion junction: CLIP2.070071_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070071
Chromosome:chromosome 8
Location:2252431
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g370601 (1 of 1) K14559 - U3 small nucleolar RNA-associated protein MPP10 (MPP10) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAGATCCCACGCCGCCACGCGTAATCGTGTAATGGTGGGTTGGTGGCA
Internal bar code:TACCTTTCGGATTTTTCGTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:930
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTGTGCAGGTTGAACCGC
Suggested primer 2:CTGTTGTGTGGAAAGCGGTG