Insertion junction: CLIP2.070076_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.070076
Chromosome:chromosome 12
Location:9019316
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g544900 (1 of 1) PTHR16470:SF0 - UBIQUITIN DOMAIN-CONTAINING PROTEIN UBFD1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGTTAGCATTCCTCCGCAACACGTGCCGCCTGCAAGTCCGCAACACG
Internal bar code:GTCGGAACGTCCGGTTGTAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:132
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGATCTGGATCGGGTCTG
Suggested primer 2:ACCCAACTGTTGTGTGCTGA