Insertion junction: CLIP2.070078_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070078
Chromosome:chromosome 12
Location:1172936
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g490700 MIN1 (1 of 1) IPR000008//IPR018392 - C2 domain // LysM domain; Mini-eyespot protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATACCCCAAGTTCACCCTACCGAACTTCAAAACATACCCCGCCGCGCAC
Internal bar code:GGACTGGGAAGCGCAGGTTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2424
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GTACTACGAGGTGAGGGGGT
Suggested primer 2:CGCAATCACGCAGCTCTTAC