Insertion junction: CLIP2.070080_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070080
Chromosome:chromosome 3
Location:8766249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g207601 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCTAGCCCTGCTCTGCTGGTCCAGTCCTGGCAACGCGACGACAGCAC
Internal bar code:TGATAGTTGGAAAGTGGGAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2089
LEAP-Seq percent confirming:84.0909
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGATAGTGAGACGGAGC
Suggested primer 2:TACGGTCGAATACGCGGAAG