Insertion junction: CLIP2.070082_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070082
Chromosome:chromosome 16
Location:1144362
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650050 (1 of 2) PTHR12231//PTHR12231:SF112 - CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN // RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGATGCTGCTGGCTCAAGCCAGTCGCTCACACCCAGCGTCGAACACG
Internal bar code:AAAAGACTAGTTCTAAGAGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1487
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGTGCTAGCAGCTACCGG
Suggested primer 2:TGATCGCCTGCTAACGCTAG