Insertion junction: CLIP2.070082_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070082
Chromosome:chromosome 16
Location:1144367
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650050 (1 of 2) PTHR12231//PTHR12231:SF112 - CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN // RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGACAGCAGGGATACGTATGCGCACGAGCTTTGTATTCTTCCTCGCAGT
Internal bar code:AAAAGACTAGTTCTAAGAGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2063
LEAP-Seq percent confirming:98.1818
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:TGATCGCCTGCTAACGCTAG
Suggested primer 2:GTAGTGCTAGCAGCTACCGG