Insertion junction: CLIP2.070093_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070093
Chromosome:chromosome 12
Location:6302075
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g801441 CDS
lncRNA_TCONS_00111360 CDS
lncRNA_TCONS_00113075 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCTCAATACATGGATGCAGCGCCCAGCCGGGGGCCGCGCTCAAAGCA
Internal bar code:ACACGTGAGGTGCGGACTCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:94
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACAAGCATGACACGGTA
Suggested primer 2:CGCGTCCTCAATATCCGTCA