Insertion junction: CLIP2.070097_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070097
Chromosome:chromosome 10
Location:5385956
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g457050 (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain 5'UTR
Cre10.g457100 (1 of 1) 1.13.11.79 - 5,6-dimethylbenzimidazole synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTTAAACGCATTGCTATCGTATTGGCCTCCGCCTTTTTGTTGCGAGC
Internal bar code:CAAGGGTGCTCAGCCTCGGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2575
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCTGAGATACGCATCCTT
Suggested primer 2:AGGGTTTATGCAGGAGTGGC