Insertion junction: CLIP2.070099_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070099
Chromosome:chromosome 1
Location:7171437
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g051350 (1 of 3) PF13563 - 2'-5' RNA ligase superfamily (2_5_RNA_ligase2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTTGGTATGCAGGCCTGCTGAGCGAGATGGTGGCTTTGGCGACGCAG
Internal bar code:AGTCGGGTTAATGACCCACGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2647
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GACCGTGTTGTACCTGCAGA
Suggested primer 2:TACTACTGCTGCCAGCGATG