Insertion junction: CLIP2.070099_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070099
Chromosome:chromosome 1
Location:7171444
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g051350 (1 of 3) PF13563 - 2'-5' RNA ligase superfamily (2_5_RNA_ligase2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGAATATATAGAATCGTGGTGCAATTGACAGGCGCCTTTACGGGGTA
Internal bar code:AGTCGGGTTAATGACCCACGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3285
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TACTACTGCTGCCAGCGATG
Suggested primer 2:GACCGTGTTGTACCTGCAGA