Insertion junction: CLIP2.070101_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070101
Chromosome:chromosome 7
Location:39725
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g312150 (1 of 1) PF00580//PF13361 - UvrD/REP helicase N-terminal domain (UvrD-helicase) // UvrD-like helicase C-terminal domain (UvrD_C) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAGTACAACGACGTTGCCTGAATATCTTGATCTGGGGAGATTGTGTAG
Internal bar code:CCGTGCCTGCATTTGAGGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:719
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TACATTTCCCCCTTCGTGGC
Suggested primer 2:TCCAAAGTCGGGTATGGTGC