Insertion junction: CLIP2.070105_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.070105
Chromosome:chromosome 12
Location:5662381
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531850 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAACGCCCCTGCTCAACCGACCGCATGGTGCTCTTGCACGGCACGACT
Internal bar code:GAATTAGTTATCTGCGTTGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:535
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTTGTTGGTTACGCTTGC
Suggested primer 2:AGTCCCTTAGCCAACATGCC