Insertion junction: CLIP2.070107_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070107
Chromosome:chromosome 12
Location:2709854
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g505000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACCGCTCGGCCTCTGCCTCGCCCCCTCGCACCGCCTAGTCCTCCTCCT
Internal bar code:GCTTCGCTGTGGGGATGTCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3440
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGAAGAGGAGAAGGGGC
Suggested primer 2:CTTCGCTGTGTGTTTCAGGC