Insertion junction: CLIP2.070110_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070110
Chromosome:chromosome 14
Location:2524370
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g624500 RRP46 Exosome complex exonuclease component; (1 of 1) K12590 - exosome complex component RRP46 (RRP46, EXOSC5) 3'UTR
Cre14.g624550 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTCCCTTCAACTGTAATCGAGCGCATCTATCTGCTTGCCCAACCAATT
Internal bar code:AACATGAGGCTTGTCCGAGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5563
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:GCACATACTCCCGCGATACA
Suggested primer 2:ACCTTAGGACATGCAGTGGC