Insertion junction: CLIP2.070111_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070111
Chromosome:chromosome 12
Location:2096325
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510150 (1 of 24) IPR001680//IPR017986//IPR020472 - WD40 repeat // WD40-repeat-containing domain // G-protein beta WD-40 repeat 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGATGCGCGAACGAAAGAACACAAGGCTGCTGCAATGCATTGCGCGA
Internal bar code:AAAGTCCTCTTTATGGTTTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1669
LEAP-Seq percent confirming:97.6744
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGTATTTGTCCGCTCCA
Suggested primer 2:GCTGTACAACGTGGACCAGA