Insertion junction: CLIP2.070134_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070134
Chromosome:chromosome 4
Location:3354120
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g227350 CCR4 Putative NOT-complex component; (1 of 1) K12580 - CCR4-NOT transcription complex subunit 3 (CNOT3, NOT3) gene_edge/outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGGGTTGGGGCTGGCCGGGTGGACGGACGGGAAGAAAGCAACATGCC
Internal bar code:GTTAGTTCCCGTGCTTACAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1047
LEAP-Seq percent confirming:24.6377
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAACAGGGACGCACTGAG
Suggested primer 2:CAGTAAGAGGGCCTGGGTTG